Fishing for enzymes deep in the ocean
When a research team pulls up a trawling net from the ocean floor, researchers often scramble to douse the specimens in ethanol or formaldehyde. It’s important to prevent decay of organisms that usually die before they even reach the surface. But , a chemist studying marine bioluminescence, would rather they were frozen.
“If you throw a net in the ocean, you will probably find a lot of bioluminescent organisms,” he said. About 90% of deep sea species produce light; but that glow is almost invisible in bright daylight, and his shipboard colleagues are usually interested in other topics. To retrieve and freeze bioluminescent tissue samples before they are pickled in formaldehyde, he said, “I must be very quick.”
Back in the lab at the University of Sao Paulo, Oliveira’s research team investigates the activity of luciferase enzymes, which produce light through a reaction between oxygen and a family of substrate molecules. While some luminescence systems, such as those from comb jellies, are well understood, working with other organisms, such as segmented worms, is “very, very difficult,” Oliveira said, “because their systems are completely new. … Most of the time you have no idea what you’re dealing with.”
Biotechnologists have found for the best-known luciferases, which come from jellies and fireflies. Still, surprisingly little is known about the other biochemical systems that produce light, a phenomenon that evolved on at least 94 independent occasions.
Oliveira is looking for enzymes with properties that could be biochemically interesting and lead to novel uses, such as detecting magnesium or calcium without needing to use fluorescence microscopy. He said, “You can find a lot of interesting things in these weird animals.”
Enjoy reading ASBMB Today?
Become a member to receive the print edition four times a year and the digital edition monthly.
Learn moreGet the latest from ASBMB Today
Enter your email address, and we鈥檒l send you a weekly email with recent articles, interviews and more.
Latest in Science
Science highlights or most popular articles

Understanding the roles of extracellular matrix and vesicles in valvular disease
MOSAIC scholar Cassandra Clift uses mass spectrometry and multiomics to study cardiovascular calcification and collagen dysregulation, bridging her background in bioengineering and biology to investigate extracellular vesicles and heart disease.

Lipid profiles reveal sex differences in type 2 diabetes
Researchers explored the lipid profiles of individuals with type 2 diabetes and identified potentially useful lipid biomarkers for this condition.

Serum lipids may predict early diabetes risk
Researchers found that levels of two key fatty acids may predict worsening tolerance for glucose, independent of body fat and insulin levels. In turn, these fatty acids may serve as early T2D biomarkers.

Sex and diet shape fat tissue lipid profiles in obesity
Researchers found that sex hormone levels and diet both influence inflammation and lipid composition in obesity.

Mapping the placenta鈥檚 hormone network
Study uncovers how the placenta actively metabolizes not only glucocorticoids but also novel androgens and progesterones, reshaping our understanding of pregnancy and its complications.

Biochemists and molecular biologists sweep major 2025 honors
Recent Nobel, MacArthur and Kimberly Prize honorees highlight the power of biochemistry and molecular biology to drive discovery, including immune tolerance, vaccine design and metabolic disease, and to advance medicine and improve human health.